Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTATTTCAGTATGTACAGGA
.((((((((((...((((((((&))))))))....)))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152564
GeneSymbolVPS13B
Binding site6939,6963
Score0.923
Seed1
Au0.559
Energy-17.8
Binding len24
Me-9.286
Phylopstem3.5394674363636365
Phylopflank3.5763184874999996
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure