Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGCCTGGCACTGGAGCTGG
...(((((.((((((((((((&))))))))))).......).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152568
GeneSymbolNKX6-3
Binding site1460,1486
Score0.846
Seed0
Au0.353
Energy-23.3
Binding len26
Me-7.571
Phylopstem3.8293598421052635
Phylopflank2.5819481224999996
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure