Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCTGGCTGCAGA
(((((((((((((((......&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152568
GeneSymbolNKX6-3
Binding site898,915
Score0.904
Seed1
Au0.397
Energy-22.3
Binding len17
Me-4.171
Phylopstem-0.3585191
Phylopflank-0.6339492875000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure