Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTAAAGCTCTGTATGCTGGGA
.(((((((((((..((......&.))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152573
GeneSymbolRASEF
Binding site4827,4850
Score1.0
Seed1
Au0.662
Energy-18.4
Binding len17
Me-5.939
Phylopstem4.202711363636364
Phylopflank3.3024725956250003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure