Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAAGACCGTTTTCTGATAATGGCTGCAGA
((((((((((((((....(((&)))...))))))...........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152581
GeneSymbolMOSPD2
Binding site1308,1340
Score0.923
Seed1
Au0.485
Energy-20.6
Binding len32
Me-4.906
Phylopstem4.337300132
Phylopflank3.1750049925
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure