Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCATTTATTACTTTTGAGAACCCTGCAGATGCTAAGAATGCTGCGAA
(((((((.(((.(((((.(((&.))).))))).))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152585
GeneSymbolRBMY1F
Binding site238,290
Score0.846
Seed1
Au0.588
Energy-17.8
Binding len29
Me-9.598
Phylopstem0.33787142857142854
Phylopflank1.5844096145
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure