Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCCGCAGCAGGCC
..((.(((((((..(.(((((&)))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152589
GeneSymbolC12orf50
Binding site1216,1234
Score0.923
Seed0
Au0.426
Energy-19.5
Binding len18
Me-11.455
Phylopstem2.0699650857142857
Phylopflank2.557717628
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure