Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAGCTGCCAGTGTAT
.((((.((((((((((..(((&))).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152589
GeneSymbolC12orf50
Binding site1617,1637
Score0.846
Seed0
Au0.618
Energy-16.9
Binding len20
Me-5.694
Phylopstem2.825428181818182
Phylopflank2.68859644375
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure