Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCAGCAAGCAGTCCTCCCGGCACCGTCGGAAGCGCAGTTGCAGC
(((((((((((.((.(..(((&.)))...).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152591
GeneSymbolCCDC63
Binding site13,62
Score0.846
Seed1
Au0.309
Energy-23.3
Binding len24
Me-8.02
Phylopstem-0.17237795454545457
Phylopflank-0.33502555958333324
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure