Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGACCAACGGCTGCGGG
(((((((((.(((((..(((.&))))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330493
GeneSymbolOSCP1
Binding site141,161
Score0.923
Seed1
Au0.338
Energy-21.2
Binding len20
Me-5.413
Phylopstem-0.30312292222222226
Phylopflank-0.19839559749999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure