Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCTGCAGCAAGTGGACGAGACTTTGCGGCAGCTGACAGA
((((((((((...((((((((&.))))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330493
GeneSymbolOSCP1
Binding site505,546
Score0.923
Seed1
Au0.456
Energy-20.6
Binding len21
Me-11.398
Phylopstem5.691394218181819
Phylopflank3.1346507687500003
Longest consecutive pairings15
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure