Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((((((&))))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152592
GeneSymbolSYNE3
Binding site4846,4870
Score0.923
Seed1
Au0.397
Energy-29.4
Binding len24
Me-10.109
Phylopstem0.39282190000000006
Phylopflank-0.27670298374999996
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure