Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCACGCCAGGGGCCAGG
..(((((((((.....((((((&)))))).....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152592
GeneSymbolSYNE3
Binding site4007,4028
Score0.846
Seed1
Au0.368
Energy-25.8
Binding len21
Me-11.418
Phylopstem0.38180622222222227
Phylopflank0.06397581249999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure