Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTCCCAATCAGGGAAGAGGACCGCAGCTGCAC
.(((((((((((((.(.....&.).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152592
GeneSymbolSYNE3
Binding site2894,2930
Score0.923
Seed1
Au0.382
Energy-27.3
Binding len17
Me-4.529
Phylopstem-0.44110920000000003
Phylopflank-0.3193703675
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure