Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTGTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152595
GeneSymbolPGBD4
Binding site5610,5639
Score0.923
Seed1
Au0.426
Energy-28.9
Binding len24
Me-10.109
Phylopstem0.2074801818181818
Phylopflank-0.0820821
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure