Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGAAGGTTGAAGCAGGAGGATCACTTGAGGCCAGGAGGGCCAGG
..(((((((((((((((((((.&))))))))))))..............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152595
GeneSymbolPGBD4
Binding site4739,4789
Score1.0
Seed1
Au0.485
Energy-26.4
Binding len50
Me-4.957
Phylopstem-0.03985765306122447
Phylopflank-0.09915844124999999
Longest consecutive pairings12
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure