Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGACTGCAGCG
.....(((((((((((.((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152595
GeneSymbolPGBD4
Binding site238,254
Score1.0
Seed0
Au0.412
Energy-23.8
Binding len16
Me-13.666
Phylopstem0.10160645454545453
Phylopflank0.11772618625
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure