Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGCAGCAAGCTCATAAACTTAACTTGACCGCAGGTGTG
..(((.((((((((((((((.&))))))).........................))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152595
GeneSymbolPGBD4
Binding site4421,4465
Score1.0
Seed0
Au0.559
Energy-23.3
Binding len44
Me-6.858
Phylopstem0.11635208358974357
Phylopflank0.08302757825000001
Longest consecutive pairings7
Position of longest consecutive pairings37
Pairings in 3prime end7
Position3UTR
2D Structure