Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152601
GeneSymbolZNF709
Binding site4018,4051
Score0.846
Seed1
Au0.412
Energy-27.3
Binding len22
Me-10.109
Phylopstem-2.2402309999999996
Phylopflank0.35795683499999986
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure