Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAGGAAATTGTACAGAGATGTGATGTTGGAGA
......(((((((((((((((.&))))))))))).......................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152606
GeneSymbolZNF540
Binding site437,476
Score0.846
Seed0
Au0.618
Energy-19.7
Binding len39
Me-15.567
Phylopstem0.5581035999999999
Phylopflank0.6623623212499999
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end7
PositionCDS
2D Structure