Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCTGTAAA
(((((((((.(((........&))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152606
GeneSymbolZNF540
Binding site2635,2649
Score1.0
Seed1
Au0.662
Energy-17.5
Binding len14
Me-7.005
Phylopstem-0.19662383333333328
Phylopflank-0.34858464749999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure