Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGGGAGCAGCACAGCCTGCAGCTGCAGA
((((((((((((((((...((&.))...)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152610
GeneSymbolCCDC185
Binding site1223,1256
Score0.923
Seed1
Au0.353
Energy-27.2
Binding len24
Me-3.938
Phylopstem0.39074925294117646
Phylopflank0.60425333375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure