Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCTCAAGGGAGCCAGTGA
(((((((((((((..((((...&))))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152612
GeneSymbolCCDC116
Binding site2158,2178
Score0.923
Seed1
Au0.515
Energy-28.4
Binding len20
Me-5.53
Phylopstem-0.2791993846153847
Phylopflank-0.07411894874999994
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure