Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCCGAGAGGGCCGC
...((((.((((((.((((((.&)))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152616
GeneSymbolTRIM42
Binding site1152,1170
Score0.923
Seed0
Au0.382
Energy-23.2
Binding len18
Me-9.564
Phylopstem2.35061
Phylopflank1.956931755
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure