Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCACTCATTCATGCTGCCCTGCAACCACAGCCTGTGCGAGAAGTGCCTGCGGCAGCTGCAGA
(((((((((((((((((.(((&.))).))))))).........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152616
GeneSymbolTRIM42
Binding site623,689
Score0.923
Seed1
Au0.382
Energy-27.9
Binding len48
Me-3.938
Phylopstem2.3066195
Phylopflank1.5038106392500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure