Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCCTTATTCATCTGTG
..((((.((.(((((((((((&))))))))))).....)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152621
GeneSymbolSGMS2
Binding site3789,3813
Score0.846
Seed0
Au0.662
Energy-19.4
Binding len24
Me-7.743
Phylopstem-0.11553332727272725
Phylopflank-0.0832750775
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure