Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCGAG
(((((((((((((((((((((&))))))))).........))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152623
GeneSymbolCDC20B
Binding site346,386
Score0.846
Seed1
Au0.441
Energy-19.6
Binding len40
Me-3.938
Phylopstem-0.23184783333333334
Phylopflank0.18514551
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end8
PositionCDS
2D Structure