Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTTCCAGAAAGAAGACAGTCAAACAAAGTTTTTGGAGCTGGC
..((((((((((((((((.((.&)).)))))))).......................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152628
GeneSymbolSNX31
Binding site896,939
Score0.846
Seed1
Au0.485
Energy-20.6
Binding len43
Me-4.957
Phylopstem-0.005486784615384625
Phylopflank0.30916654
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end6
PositionCDS
2D Structure