Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACGGGTTCCTCTTCTGCAGGGTGCGCTACAGCCAGCTGCAC
.(((((((..(((((((..((&.))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152628
GeneSymbolSNX31
Binding site230,277
Score1.0
Seed1
Au0.397
Energy-21.9
Binding len20
Me-6.092
Phylopstem-0.21424704285714283
Phylopflank0.1211586975
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure