Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTCTGAGAAGAAGCTGGAAGACGCACGGGCTCGTTGTGAGGGCCAGGA
.((((((.(((((((.((....&.)))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152631
GeneSymbolFAM47B
Binding site1089,1139
Score0.846
Seed1
Au0.397
Energy-19.2
Binding len20
Me-6.34
Phylopstem4.252078
Phylopflank4.27040025125
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure