Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGGCGACGGCATTGTGCAACGCCAGGC
.((((((.((((((((......&.))))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152635
GeneSymbolOIT3
Binding site342,371
Score0.846
Seed1
Au0.397
Energy-19.2
Binding len20
Me-6.107
Phylopstem2.8162291249999996
Phylopflank4.7862004237499995
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end2
PositionCDS
2D Structure