Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGATGAAAATGAATGTGAGCAAAACAACGGTGGCTGCAGT
((((((((((.(((((...((&.))...))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152635
GeneSymbolOIT3
Binding site598,642
Score0.846
Seed1
Au0.574
Energy-23.2
Binding len23
Me-6.762
Phylopstem5.961124879999998
Phylopflank4.209389315
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure