Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCTCCCAGCAGACGGAGCCAGG
..((((((((((((((((..((&))..))))).))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152643
GeneSymbolKNDC1
Binding site5677,5700
Score0.846
Seed1
Au0.382
Energy-27.9
Binding len23
Me-4.957
Phylopstem-0.5516664666666667
Phylopflank-0.4893550299999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure