Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAGACCCAGCTGA
...((((((.((((...((((&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152647
GeneSymbolFAM227B
Binding site143,160
Score1.0
Seed0
Au0.559
Energy-19.8
Binding len17
Me-8.726
Phylopstem-0.22113761666666668
Phylopflank0.2928272945
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure