Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCCAACTGTAGTGCT
..(((.(((((((((..(((.&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152653
GeneSymbolUBE2E2
Binding site359,377
Score0.923
Seed0
Au0.529
Energy-19.9
Binding len18
Me-7.091
Phylopstem6.217531211111111
Phylopflank6.173444485000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure