Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCGCCGCCTGTGTCCGCGCCCGCACCCGCGGCTGCGC
.(((((((((((.(((..(((&.))).))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152657
GeneSymbolGGN
Binding site1658,1699
Score0.923
Seed1
Au0.25
Energy-27.1
Binding len21
Me-5.082
Phylopstem0.5838740909090909
Phylopflank0.8724781362500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure