Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACGGTGCCAGGAGCGGCACCAGGCGCAGCTGCAGG
(((((((((((.(((......&.))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152658
GeneSymbolTHAP8
Binding site627,666
Score1.0
Seed1
Au0.309
Energy-25.0
Binding len17
Me-7.517
Phylopstem0.11913753636363636
Phylopflank0.49688196475000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure