Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCATCGTCTTTCCGTCCTCTGAGGCGACGGCCGCGGCTGCAC
.(((((((((((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152663
GeneSymbolRALGPS2
Binding site128,174
Score1.0
Seed1
Au0.441
Energy-29.0
Binding len17
Me-3.793
Phylopstem0.46339273333333325
Phylopflank0.8576731548025
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure