Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGGCCCGGGATTACCCAGTCAACCAAGGAGCTTGCAGTT
.(((((((((((.((((((((.&.))))))))......)))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152677
GeneSymbolZSCAN4
Binding site561,601
Score0.846
Seed1
Au0.529
Energy-22.3
Binding len30
Me-5.082
Phylopstem-0.5857209285714287
Phylopflank-0.3335634899999999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end7
Position5UTR
2D Structure