Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATTTGGAAGCAGCTTGTAAT
((((((((((....(((((((&)))))))......)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152678
GeneSymbolDENND6A
Binding site661,686
Score0.923
Seed1
Au0.559
Energy-19.7
Binding len25
Me-12.255
Phylopstem1.7758926454545454
Phylopflank1.1919723725
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure