Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGAGGCGGCAGTTGCAGT
((((((((((.(((....(((&))).....))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152680
GeneSymbolTMEM154
Binding site6228,6251
Score0.846
Seed1
Au0.441
Energy-21.6
Binding len23
Me-7.731
Phylopstem-0.24064674000000003
Phylopflank0.07122778500000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure