Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGCAGATGCTTCTGCTGATCACCGCAGCTCTAGCAAT
((((((((((((.((...(((&.)))...))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152680
GeneSymbolTMEM154
Binding site3943,3984
Score1.0
Seed1
Au0.574
Energy-21.2
Binding len25
Me-5.46
Phylopstem-0.20365929333333335
Phylopflank0.08388323125000002
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure