Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTTGTGTGCTTTTAGTTGTTGGATAACTGAGGTC
((((((((((((((((((((..&)))))).))))))))))...................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152682
GeneSymbolRWDD4
Binding site1617,1658
Score0.846
Seed1
Au0.618
Energy-19.4
Binding len41
Me-3.938
Phylopstem0.9297055349999997
Phylopflank1.454131915
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end6
Position3UTR
2D Structure