Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTGCCCCAAAGATGAGGGCCCAGGAGGACCTCGAGGGCCGGA
..(((((((((((((((((...&.)))))))))).......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152685
GeneSymbolSLC23A1
Binding site31,75
Score0.846
Seed1
Au0.338
Energy-25.6
Binding len26
Me-4.957
Phylopstem0.535218675
Phylopflank0.31739591772727277
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position5UTR
2D Structure