Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATGAATGAGAACATTGGCCCAGAGAGGATGACCCAGG
..(((((((((((((((((...&.)))))))))))).)..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152686
GeneSymbolDNAJC18
Binding site2261,2301
Score1.0
Seed1
Au0.471
Energy-26.5
Binding len22
Me-4.957
Phylopstem0.33734097500000004
Phylopflank0.11988664624999998
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure