Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTAGTGGCTTGTAGGGGACAACTGCTCAGTTGCAGG
((((((((((((((((.....&.))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152686
GeneSymbolDNAJC18
Binding site3187,3226
Score0.923
Seed1
Au0.5
Energy-21.2
Binding len20
Me-3.938
Phylopstem0.07407594777777778
Phylopflank-0.05657612425
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end3
Position3UTR
2D Structure