Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCTGTGGAGCTGAGCTGCC
..((((((.(((((.((((((&)))).....)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152686
GeneSymbolDNAJC18
Binding site2621,2645
Score0.846
Seed1
Au0.471
Energy-19.1
Binding len24
Me-6.749
Phylopstem0.023931245454545443
Phylopflank-0.08351888937500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure