Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAAAACCAACCTATGCAGGCTGCAAT
(((((((((((((((......&.)))))...)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152694
GeneSymbolRTL3
Binding site1544,1573
Score0.846
Seed1
Au0.5
Energy-20.1
Binding len21
Me-4.171
Phylopstem0.44841624736842106
Phylopflank0.32193595375000006
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure