Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGTATGGCATCACAGCTGCAAG
(((((((((.(((((((((((&))))...))))))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152696
GeneSymbolHIPK1
Binding site203,230
Score0.846
Seed1
Au0.441
Energy-20.6
Binding len27
Me-5.18
Phylopstem5.24314375
Phylopflank2.3147784600000008
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure