Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCAGACCCAGCAGCCGTGGCTGCAGC
((((((((((((((((..(((&.)))..)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152698
GeneSymbolAMER3
Binding site213,243
Score0.923
Seed1
Au0.294
Energy-31.1
Binding len23
Me-3.938
Phylopstem0.047043149999999985
Phylopflank1.228675692500001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure